DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and HB4

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_182018.1 Gene:HB4 / 819100 AraportID:AT2G44910 Length:318 Species:Arabidopsis thaliana


Alignment Length:141 Identity:26/141 - (18%)
Similarity:51/141 - (36%) Gaps:42/141 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 HYASLLSCIRSKAGEQQFNAASDESSKNVLR----------ICLNSMGSP-LWYGKQFSEDFLRF 231
            |:::.:..:||.:     :||:..:.|.|:|          ||...:.|. .|            
plant   288 HHSAKIERVRSNS-----SAANLMAKKRVIRMLIVIVILFFICWTPVFSANAW------------ 335

  Fly   232 MVLLKAIVRNTLSVCLITVP---LHLF-------NHLDDVYLSKKVRNMFDFSFDLEAFAGQMEE 286
                :|...::..:.|..||   :||.       |.:...:::|:.|..|..:|...:..|....
plant   336 ----RAFDTDSADISLSGVPISFIHLLSYTSACVNPIIYCFMNKRFRMGFLATFTCCSSRGAQGR 396

  Fly   287 QANPAFKEYHG 297
            :..|...:..|
plant   397 RMVPGVADEEG 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 1/2 (50%)
HB4NP_182018.1 HD-ZIP_N 8..124 CDD:461370
Homeodomain 162..216 CDD:459649
HALZ 218..261 CDD:128634
Blue background indicates that the domain is not in the aligned region.

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