DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and HDG3

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_180796.2 Gene:HDG3 / 817798 AraportID:AT2G32370 Length:725 Species:Arabidopsis thaliana


Alignment Length:142 Identity:34/142 - (23%)
Similarity:53/142 - (37%) Gaps:45/142 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GGIRSTYQHFGPQGGQDSG---FPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSIS 107
            ||..:|      ..|.|||   |.|             .|:.||.|                   
plant    29 GGTDNT------NAGNDSGDQDFDS-------------GNTSSGNH------------------- 55

  Fly   108 DKCEDSGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWF 172
                ..||..|...:..:|....::.||:.::...|:...:....:|.:|:|.|||...|:|.||
plant    56 ----GEGLGNNQAPRHKKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWF 116

  Fly   173 QNRRSKYKKMMK 184
            ||:|::.|...:
plant   117 QNKRTQNKNQQE 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 17/55 (31%)
HDG3NP_180796.2 Homeodomain 69..125 CDD:459649 17/55 (31%)
ClpA <119..>206 CDD:440308 2/10 (20%)
START_ArGLABRA2_like 247..471 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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