DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and lbx1

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001072559.1 Gene:lbx1 / 780014 XenbaseID:XB-GENE-6455157 Length:265 Species:Xenopus tropicalis


Alignment Length:237 Identity:64/237 - (27%)
Similarity:89/237 - (37%) Gaps:79/237 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 PMHQNSYS---GYHLGSYA--PPCASPPKD-------------------------DFSISDKCED 112
            |..:.||:   ..||.|.|  ||.|..|..                         :.|:....|.
 Frog    45 PSVRRSYTICGTAHLLSTAEKPPAAGLPLSSRALLSQTSPLCALEELASKTFKGLEVSVLQAAEG 109

  Fly   113 -SGLRVNGK---GKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQ 173
             .|:.:.|:   .||.||.||.:::.|:.:|.:||...:||:..:|.::|..||||..||..|||
 Frog   110 RDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQ 174

  Fly   174 NRRSKYKK---MMKA------AQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALET 229
            |||:|.|:   .|||      ...|.|...:                :...||..        ||
 Frog   175 NRRAKLKRDLEEMKADVESVKKMSPSTVEAV----------------LTISELEE--------ET 215

  Fly   230 NGTLALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVSE 271
            |..           ...|.|.||...| .||.|...|:|::|
 Frog   216 NSV-----------RDDSRSRSPQLGL-SGHMPLSPSSPLTE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 25/55 (45%)
lbx1NP_001072559.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Homeodomain 126..182 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..265 14/54 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.