Protein Alignment Dll and Vsx1

DIOPT Version :10

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_001103016.1
• Gene: Vsx1 / 689704
• RGDID: 1305667
• Length: 369
• Species: Rattus norvegicus
• Alignment Length: 279
• Identity: 74/279 - (26%)
• Similarity: 104/279 - (37%)
• Gaps: 57/279 - (20%)

  Fly    66 PSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVN-GKGKKMRKPRT 129
            |.|..|.....||.        .|||..........|..|.|::..|..:.:. ||.|| |:.||
  Rat   118 PEPAVAQSPVHPPP--------ALGSQQRSENISTSDGDSPSEEKNDPKMSLTLGKRKK-RRHRT 173

  Fly   130 IYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQGPGTNSG 194
            ::::.||::|.:.|....|..:..|..||....|.:.::::||||||:|::|..|...|....:.
  Rat   174 VFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 238

  Fly   195 MPLGG---------------------GGPNP---GQHSPN-QMHSGE----LANGRFLWAALETN 230
            ..|.|                     |...|   |.|..: :|...|    ||.   || .|:..
  Rat   239 YGLYGAMVRHCIPLPDSVLNSADSLQGSCAPWLLGMHKKSTEMRKPESEEKLAG---LW-ELDHL 299

  Fly   231 GTLALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFPPTGLSPPTQAPWDQKPHW 295
            ...|.....|...|.|..|.:|...|........||   |....:..|:|.|  ||.
  Rat   300 RKGAKKDEDGPERGPGKASLNPEGSLEDVAIDLSSS---SRQETKKMPSGSS--TQG-------- 351

  Fly   296 IDHKPPPQMTPQPPHPAAT 314
            ..|.|.||:. |||...|:
  Rat   352 CTHAPGPQVL-QPPQVGAS 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeodomain	125..181	CDD:459649	19/55 (35%)
Vsx1	NP_001103016.1	Homeodomain	169..225	CDD:459649	19/55 (35%)