Protein Alignment Dll and Cdx2

DIOPT Version :9

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_076453.1
• Gene: Cdx2 / 66019
• RGDID: 621234
• Length: 310
• Species: Rattus norvegicus
• Alignment Length: 261
• Identity: 75/261 - (28%)
• Similarity: 109/261 - (41%)
• Gaps: 76/261 - (29%)

  Fly    10 PKYMD--GGNTAASVTPGINI-----PGKSAFVELQQHAAAGYGG-IRSTYQHFGPQG------- 59
            |:|.|  |.:.||:.....|:     ||.|        ....||. :|..:..:.|.|
  Rat    35 PQYPDYGGYHVAAAAAAAANLDSAQSPGPS--------WPTAYGAPLREDWNGYAPGGAAAANAV 91

  Fly    60 --GQDSGFPSPRSALGYPFPP---MHQNSYSGYHLGSYAPPCAS----------PPKDDFSISDK 109
              |.:.|  ||.:|:||..|.   .|.:.:...|..:.||.|||          |.....:.:::
  Rat    92 AHGLNGG--SPAAAMGYSSPAEYHAHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQ 154

  Fly   110 CEDSGLRVNGKGKKMRKP-----------------RTIYSSLQLQQLNRRFQRTQYLALPERAEL 157
            ...||.|.| ..:.||||                 |.:|:..|..:|.:.|..::|:.:..:|||
  Rat   155 LSPSGQRRN-LCEWMRKPAQPSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAEL 218

  Fly   158 AASLGLTQTQVKIWFQNRRSKYKKMMK------AAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGE 216
            ||:|||::.||||||||||:|.:|:.|      ..|.|            |.|....|:|..||.
  Rat   219 AATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQP------------PAPPPPQPSQPQSGA 271

  Fly   217 L 217
            |
  Rat   272 L 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeobox	127..180	CDD:278475	26/69 (38%)
Cdx2	NP_076453.1	Caudal_act	13..170	CDD:282574	36/145 (25%)
		Homeobox	189..241	CDD:278475	25/51 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810