DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and Barhl2

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_075245.1 Gene:Barhl2 / 65050 RGDID:620726 Length:384 Species:Rattus norvegicus


Alignment Length:349 Identity:84/349 - (24%)
Similarity:116/349 - (33%) Gaps:140/349 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GPQ------GGQDSGFPS--PRSALGYPFP---PMHQNSYSGYHLGS------------------ 91
            |||      .||....||  |..:| .|.|   |..|...:...|||                  
  Rat    82 GPQHHHHLHHGQQPPPPSAPPAQSL-QPSPQQQPPPQPQSAAQQLGSAAAAPRTSTSSFLIKDIL 145

  Fly    92 -----------YAPPCASP---PKDDFSIS-----------------DKCEDS-------GLRVN 118
                       |:...:||   ||.:.:.:                 ||.|||       |.:..
  Rat   146 GDSKPLAACAPYSTSVSSPHHTPKQECNAAHESFRPKLEQEDSKTKLDKREDSQSDIKCHGTKEE 210

  Fly   119 G-------------KGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKI 170
            |             :.||.||.||.:|..||.||.|.|:|.:||::.:|.:|||:|.||.||||.
  Rat   211 GDREITSSRESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKT 275

  Fly   171 WFQNRRSKYKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETNGTLAL 235
            |:||||:|:|:                                              :|...|.|
  Rat   276 WYQNRRTKWKR----------------------------------------------QTAVGLEL 294

  Fly   236 VHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFPPTGLSPPTQAPWDQKP------- 293
            :...|..:.......||..|.|.......|:|..:..:..:.....:||...|..|:|       
  Rat   295 LAEAGNYSALQRMFPSPYFYHPSLLGSMDSTTAAAAAAAMYSSMYRTPPAPHPQLQRPLVPRVLI 359

  Fly   294 HWIDHKPPPQMTP--QP----PHP 311
            |.:.....|.:.|  .|    |||
  Rat   360 HGLGPGGQPALNPLSNPIPGTPHP 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 31/55 (56%)
Barhl2NP_075245.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 16/52 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..237 18/82 (22%)
Homeodomain 230..286 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..384 6/20 (30%)

Return to query results.
Submit another query.