DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and SHOX2

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_003021.3 Gene:SHOX2 / 6474 HGNCID:10854 Length:355 Species:Homo sapiens


Alignment Length:286 Identity:77/286 - (26%)
Similarity:105/286 - (36%) Gaps:66/286 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AAAGYGGIRSTYQHFGPQGGQDSGFP-SPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDF 104
            |..|.||.||..:.......:.|..| |||...|...|...:...:....|.......||     
Human    83 AGGGAGGGRSPVRELDMGAAERSREPGSPRLTEGRRKPTKAEVQATLLLPGEAFRFLVSP----- 142

  Fly   105 SISDKCEDS-GLRVNGKGK-KMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQ 167
            .:.|:.||: |:...|:.| |.|:.||.::..||.:|.|.|..|.|.....|.||:..|||::.:
Human   143 ELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 207

  Fly   168 VKIWFQNRRSKYKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETN-- 230
            |::||||||:|.:|                          ..||:|.|.|......:.|....  
Human   208 VQVWFQNRRAKCRK--------------------------QENQLHKGVLIGAASQFEACRVAPY 246

  Fly   231 ---GTLALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPV-SELSPEFPPTGLSPPTQAPWDQ 291
               |.|.:...            ..||.     :.||.|..| ::|..:      |....|....
Human   247 VNVGALRMPFQ------------QDSHC-----NVTPLSFQVQAQLQLD------SAVAHAHHHL 288

  Fly   292 KPHWIDHKPPPQMTPQPPH--PAATL 315
            .||...| .|..|.|.||.  |.|||
Human   289 HPHLAAH-APYMMFPAPPFGLPLATL 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 24/55 (44%)
SHOX2NP_003021.3 Homeodomain 165..221 CDD:459649 24/55 (44%)
OAR 335..351 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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