DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and hoxb6b

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571613.1 Gene:hoxb6b / 58053 ZFINID:ZDB-GENE-000823-7 Length:224 Species:Danio rerio


Alignment Length:208 Identity:54/208 - (25%)
Similarity:83/208 - (39%) Gaps:59/208 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 INIP-GKSAFV------------ELQQHAAAGYGGIR--------STYQHFGPQGGQDSGFPSPR 69
            :::| |:.:|:            .|:.:.:|.:|...        |.||    |.|...|.....
Zfish    12 VSLPGGQESFLGQIPLYSSGYTDSLRHYPSATFGATNVQDKVYTSSYYQ----QAGGVFGRSGST 72

  Fly    70 SALGYPFPPMHQNSYSGYHLGSY-------APPCASPPKDD-----FSISDK------------- 109
            ||..|..|.:::::.....:||.       ...|.:...:.     ||..||             
Zfish    73 SACDYSTPNIYRSADRSCAIGSLEDSLVLTQDQCKTDCTEQGTERYFSTEDKPCTPVYPWMQRMN 137

  Fly   110 -CEDSGLRVNG-KGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWF 172
             |       || .|...|:.|..|:..|..:|.:.|...:||....|.|::.:|.||:.|:||||
Zfish   138 SC-------NGMPGSTGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEISHALCLTERQIKIWF 195

  Fly   173 QNRRSKYKKMMKA 185
            ||||.|:||..||
Zfish   196 QNRRMKWKKENKA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 23/55 (42%)
hoxb6bNP_571613.1 Antp-type hexapeptide 129..134 0/4 (0%)
Homeodomain 148..204 CDD:459649 23/55 (42%)

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