DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and hoxa3a

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571609.2 Gene:hoxa3a / 58049 ZFINID:ZDB-GENE-000823-3 Length:410 Species:Danio rerio


Alignment Length:332 Identity:92/332 - (27%)
Similarity:120/332 - (36%) Gaps:119/332 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 APDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFPS 67
            ||..|.:|       ::.:..|.|:...|:..                   |..|.       ||
Zfish    91 APSGPSSP-------SSLNQIPNIDSAAKNPV-------------------HVSPT-------PS 122

  Fly    68 PRSALGYPFPPM-------HQNSYSGYHLGSYAPPCA---SPPKDDFSISDKCEDSGLRVNGKGK 122
            .|..:   ||.|       .|.|.|...:.|    ||   |||....|                 
Zfish   123 TRKHI---FPWMKESRQNTKQKSCSIISVES----CAGDKSPPGSAAS----------------- 163

  Fly   123 KMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQ 187
              ::.||.|:|.||.:|.:.|...:||..|.|.|:|..|.||:.|:||||||||.||||..|.. 
Zfish   164 --KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGL- 225

  Fly   188 GPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETNGTLALVHSTGGNNGGGSNSGSP 252
                       |..|:||..||   ||                 .::|  |:||..||||...|.
Zfish   226 -----------GMMPSPGAQSP---HS-----------------PVSL--SSGGGGGGGSAYLSS 257

  Fly   253 SHYLPPG---HSPTPSSTPVSELSPEFPPTGLSPPTQAPWDQKPHWIDHKPPPQMTPQPPHPAAT 314
            .|.|...   .||:|:|....:.:....||...|            :::.||||...|.. ..||
Zfish   258 MHSLVNSVTYDSPSPASYNKPQSNTYSLPTSYPP------------LNNCPPPQKRYQGT-GTAT 309

  Fly   315 LHPQTHH 321
            ....|||
Zfish   310 PEYDTHH 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 28/55 (51%)
hoxa3aNP_571609.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..126 12/67 (18%)
Antp-type hexapeptide 127..132 2/7 (29%)
Homeodomain 164..220 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..249 13/60 (22%)
DUF4074 346..408 CDD:463833
Blue background indicates that the domain is not in the aligned region.

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