DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and lbx1a

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001020703.1 Gene:lbx1a / 564103 ZFINID:ZDB-GENE-040724-40 Length:269 Species:Danio rerio


Alignment Length:159 Identity:49/159 - (30%)
Similarity:74/159 - (46%) Gaps:26/159 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 KKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKK---MM 183
            ||.||.||.:::.|:.:|.:||...:||:..:|.::|..||||..||..||||||:|.|:   .|
Zfish   123 KKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEM 187

  Fly   184 KAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALE--TNGTLALVHSTGGNNGGG 246
            ||    ...|...:|        :.|.: ...:||:       ||  .||||....:...:....
Zfish   188 KA----DVESAKAVG--------NVPFE-KMAKLAD-------LEKRVNGTLGDSSAVSPSRSNH 232

  Fly   247 SNSGSPSHYLPPGHSPTPSSTPVSELSPE 275
            .:.|:...::.|. ||....|...|.|.:
Zfish   233 EHEGTNKLHMSPS-SPYTDHTTSKECSED 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 25/55 (45%)
lbx1aNP_001020703.1 Homeodomain 126..182 CDD:459649 25/55 (45%)

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