DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and hoxb13a

DIOPT Version :9

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001038377.1 Gene:hoxb13a / 559921 ZFINID:ZDB-GENE-050812-1 Length:303 Species:Danio rerio


Alignment Length:190 Identity:42/190 - (22%)
Similarity:69/190 - (36%) Gaps:56/190 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GYGGIRSTYQHFGPQGGQDSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCAS---------- 98
            |.|.::|..|........:....:|.::..|   |.....::.||  ||..|..|          
Zfish   112 GRGSLKSCTQPSALSYTAEKYMDTPVTSEEY---PTRAKEFAFYH--SYPSPYQSMASYLDVSVV 171

  Fly    99 -------PPKDDFSISDKCEDSGLRVNGKGKKM-------------------------------- 124
                   |..|.....|..:...| .||.|.:|                                
Zfish   172 QTLGTGEPRHDSLLPMDSYQPWAL-ANGWGSQMYCSKDQGQAGHLWKSALADVVAHQHDGGSFRR 235

  Fly   125 -RKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMM 183
             ||.|..|:.:||::|.:.:...:::...:|.:::|...|::.|:.|||||||.|.||.:
Zfish   236 GRKKRIPYTKVQLKELEKEYAANKFITKDKRRKISAVTNLSERQITIWFQNRRVKEKKFI 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeobox 127..180 CDD:278475 17/52 (33%)
hoxb13aNP_001038377.1 HoxA13_N 27..143 CDD:289085 6/33 (18%)
homeodomain 237..293 CDD:238039 19/55 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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