DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Noto

DIOPT Version :9

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001178943.1 Gene:Noto / 502857 RGDID:1562910 Length:245 Species:Rattus norvegicus


Alignment Length:234 Identity:62/234 - (26%)
Similarity:93/234 - (39%) Gaps:45/234 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 APHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAA----------GYGGIRSTYQHFGPQGG 60
            :|..|.::..|...:|    .::....|..|.::|:|.          .:|.: |.||.......
  Rat    28 SPVVPNHLARGRLESS----FSVEAILARPETREHSATSLPLSTCTSLNFGSV-SQYQVLPWVCS 87

  Fly    61 QDSGFPSPRSALGYPFPPM---------HQNSYSGYHL-GSYAPPCASPPKDDFSISDKCEDSGL 115
            ..:..|:..|...||...|         |.....|..| ||..|.|..|.|       :.....|
  Rat    88 TGTWLPTYLSVGIYPMCSMSCMPGLNVTHLFCQQGLRLTGSELPSCLGPLK-------RAPTVNL 145

  Fly   116 RVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK 180
            :.:...:..::.||::|..||.:|.:.|.:...|...|||:|||.|.||:.||:|||||||.||:
  Rat   146 QDHNTERHQKRVRTMFSEQQLGELEKVFAKQHNLVGKERAQLAARLHLTENQVRIWFQNRRVKYQ 210

  Fly   181 KMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELAN 219
            |..| .:.|            |......|:....|.:.|
  Rat   211 KQQK-LKSP------------PPDAMEEPSNSSEGNVRN 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeobox 127..180 CDD:278475 27/52 (52%)
NotoNP_001178943.1 Homeobox 158..209 CDD:278475 26/50 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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