DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Dlx6

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001414318.1 Gene:Dlx6 / 500023 RGDID:1561539 Length:298 Species:Rattus norvegicus


Alignment Length:322 Identity:109/322 - (33%)
Similarity:132/322 - (40%) Gaps:92/322 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFG---PQGGQDSGF 65
            |..|..|.........:....|.:.|...........||||.......:.|.|   ..||.:|  
  Rat    50 PPPPPPPPPQPHSQQTSPAMAGAHYPLHCLHSAAAAAAAAGSHHHHHQHHHHGSPYASGGGNS-- 112

  Fly    66 PSPRSALGYPFPPMHQNS--YSGYHLGSYAPPCASPPKDDFSISDK---CEDSGLRVNGKGKKMR 125
            .:.||...||:....|:|  ...||..|    .|:..:.|.:...|   .|:..:|.||||||:|
  Rat   113 YNHRSLAAYPYMSHSQHSPYLQSYHNSS----AAAQTRGDDTDQQKTTVIENGEIRFNGKGKKIR 173

  Fly   126 KPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQGPG 190
            ||||||||||||.||.|||:|||||||||||||||||||||||||||||:|||:||::|.     
  Rat   174 KPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQ----- 233

  Fly   191 TNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETNGTLALVHSTGGNNGGGSNSGSPSHY 255
                      |.||        |..:                                       
  Rat   234 ----------GSNP--------HESD--------------------------------------- 241

  Fly   256 LPPGHSPTPSSTPVSELSPEFPPT--------GLSPPTQAPWDQKPHWIDHKPPPQMTPQPP 309
                  |.|.|..:|..||..||.        |:|.|..:......||  :..|.|.|.|.|
  Rat   242 ------PLPGSAALSPRSPALPPVWDVSASAKGVSMPPNSYMPGYSHW--YSSPHQDTMQRP 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 50/55 (91%)
Dlx6NP_001414318.1 None

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