DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Tlx3

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001414519.1 Gene:Tlx3 / 497881 RGDID:1564190 Length:291 Species:Rattus norvegicus


Alignment Length:240 Identity:69/240 - (28%)
Similarity:97/240 - (40%) Gaps:76/240 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAPDA-----PHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGG 60
            |:||.:     ||.|       .:..:...:|.|.:.:....:....|.|.|        ||.||
  Rat     1 MEAPASAQTPHPHEP-------ISFGIDQILNSPDQDSAPAPRGPDGASYLG--------GPPGG 50

  Fly    61 Q-DSGFPS-PRSALGYPFPPMHQNSYSGYHLGSYAP------------PCASPP----------- 100
            : .:.:|| |.|..|...|.....||| .:| |.||            |.|.||           
  Rat    51 RPGAAYPSLPASFAGLGAPFEDAGSYS-VNL-SLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPS 113

  Fly   101 ----------------------KDDFSISDKCEDSGL--RV-----NGKGKKMRKPRTIYSSLQL 136
                                  ||.|:.:.......:  |:     |....|.:||||.:|.:|:
  Rat   114 VPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQI 178

  Fly   137 QQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKK 181
            .:|.:||.|.:|||..|||.||.||.:|..|||.||||||:|:::
  Rat   179 CELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 31/55 (56%)
Tlx3NP_001414519.1 None

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