DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and alx4b

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001297007.2 Gene:alx4b / 497424 ZFINID:ZDB-GENE-050208-140 Length:364 Species:Danio rerio


Alignment Length:309 Identity:76/309 - (24%)
Similarity:108/309 - (34%) Gaps:142/309 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AAAGYGGIRS-----TYQH--------FGPQGGQDSGFPSPRSALGYPFPPMHQN---------- 82
            ||.|.|.::.     |:|.        |.|..||..| ..|||       |.||:          
Zfish    22 AAPGQGRVQQANPYRTFQSSDSKYSPTFLPAKGQTYG-EKPRS-------PFHQDCPTLDDSTAE 78

  Fly    83 -SYSGYHLGSYAPPCASPP---------------KDDFSISD-----------------KCEDSG 114
             :||.|||....|.|.||.               ||...::|                 ..:|:|
Zfish    79 GAYSKYHLFMQRPACKSPSEDSKLEDGALISCYGKDGTGLTDTDMPQSADPTALDGSFISVKDAG 143

  Fly   115 LR-------------------VNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAAS 160
            |:                   .:.|||| |:.||.::|.||::|.:.||:|.|..:..|.:||..
Zfish   144 LKGQSDRPVSDIGSALDKSEAESNKGKK-RRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALR 207

  Fly   161 LGLTQTQVKIWFQNRRSKYKKMMK---------------------------AAQGP----GTNSG 194
            ..||:.:|::||||||:|::|..:                           ..|.|    |::|.
Zfish   208 TDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWLSGSSSA 272

  Fly   195 MPLGG--------------------------GGPNPGQHSPNQMHSGEL 217
            .|:.|                          |.|:|| .|..|.|.|.|
Zfish   273 SPVPGCVVPCDTVSSCMTPHPHSASGVSDFLGMPSPG-GSMAQTHMGSL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 24/55 (44%)
alx4bNP_001297007.2 None

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