DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and lbe

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:198 Identity:57/198 - (28%)
Similarity:76/198 - (38%) Gaps:48/198 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IPGKSAFVELQQHAAAGYGGIRSTYQHFGPQ--------------GGQDSGFP------------ 66
            ||  ||.:..:|..|..|.  |...:||..|              ..:|....            
  Fly   217 IP--SALLHYEQRLALDYH--RQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGST 277

  Fly    67 ---SPRSALGYPFPPMHQNSYSGYHLGSYAPPCAS------PPKD--------DFSIS-DKCEDS 113
               |||.|.........:.|.......|...|..|      .|.|        ||..| ||....
  Fly   278 ECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLD 342

  Fly   114 GLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 178
            ......:.||.||.||.:::.|:.:|.:||...:||:..:|.|:||||||:..||..||||||:|
  Fly   343 IFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAK 407

  Fly   179 YKK 181
            .|:
  Fly   408 QKR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 27/55 (49%)
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.