Protein Alignment Dll and bcd

DIOPT Version :10

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 338
• Identity: 82/338 - (24%)
• Similarity: 118/338 - (34%)
• Gaps: 116/338 - (34%)

  Fly    51 TYQHFGPQGGQDSGFPSPRSALGYP----------FPPMHQNSYS----------GY-HLGSYAP 94
            |:.|..|.     ..|.|.|   :|          .||..:|.:.          .| ::..|.|
  Fly    18 THTHPHPH-----SHPHPHS---HPHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNYIRPYLP 74

  Fly    95 PCASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAA 159
              ...||.|...|::..||.:.     ::.|:.||.::|.|:.:|.:.|.:.:||..|..|:|:|
  Fly    75 --NQMPKPDVFPSEELPDSLVM-----RRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSA 132

  Fly   160 SLGLTQTQVKIWFQNRRSKYKKM-----------------MKAAQG-PGTNSGMPLGGGG----- 201
            .|.|...||||||:|||.::|..                 ||.:.| |.:...:.||||.
  Fly   133 KLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNAL 197

  Fly   202 -PNPGQHSPN---QMHSGELANGRFLWAALETNGTLALVHSTGGNNGGGSNSGSPSHYLPPGHSP 262
             |:|...:|.   ..|..|..|              |..:..||:|...:|......| |.|..|
  Fly   198 TPSPTPSTPTAHMTEHYSESFN--------------AYYNYNGGHNHAQANRHMHMQY-PSGGGP 247

  Fly   263 TPSSTPVSELSPEFPPTGLSPPTQAPWDQKPHWIDHKPPPQMTPQPPHPAATLHPQTHHHNPPPQ 327
            .|.||.|:  ..:|                           ...|..|.    |.|..||
  Fly   248 GPGSTNVN--GGQF---------------------------FQQQQVHN----HQQQLHH----- 274

  Fly   328 MGGYVPQYWYQPE 340
            .|.:||....|.:
  Fly   275 QGNHVPHQMQQQQ 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeodomain	125..181	CDD:459649	24/55 (44%)
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	21/46 (46%)