Protein Alignment Dll and lms

DIOPT Version :10

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 242
• Identity: 66/242 - (27%)
• Similarity: 101/242 - (41%)
• Gaps: 55/242 - (22%)

  Fly    66 PSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRV-------NGKG-K 122
            |..||:..:......::...|..||:..   ||.|.....:.|..:|....:       ||.| .
  Fly    23 PEMRSSTSFEDSVQDESGRGGNCLGASR---ASSPATSSCLDDNMDDGKSDIDLASDDGNGLGDD 84

  Fly   123 KMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQ 187
            :.::|||.:|:.|::.|...|:|.:||::.:|..||..|.||:||:||||||||:|:|:..
  Fly    85 RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKY---- 145

  Fly   188 GPGTNSGMPLGGGGPNPGQHSPNQMHSGELAN----GRFLWAALETNGTLALVHSTGGN------ 242
               |:....|       ..|...|:..|.||.    |..||...:|        .||..
  Fly   146 ---TSDVETL-------ASHYYAQLGIGGLARPMVVGDRLWLFSQT--------PTGPTPIQSIM 192

  Fly   243 -NGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFPPTGLSPPTQAP 288
             ||.||.:       |...:.|.:.:|:.    .:..:|..||...|
  Fly   193 LNGSGSAA-------PMASATTATGSPMR----PYATSGGMPPLPGP 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeodomain	125..181	CDD:459649	27/55 (49%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	17/75 (23%)
		Homeodomain	87..143	CDD:459649	27/55 (49%)