Protein Alignment Dll and Hoxc9

DIOPT Version :10

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_001094377.1
• Gene: Hoxc9 / 368178
• RGDID: 1595784
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 61/215 - (28%)
• Similarity: 82/215 - (38%)
• Gaps: 43/215 - (20%)

  Fly     2 DAPDAPHTPKYMDGGNTAASVTPGINIPGKSAFV----ELQQHAAAGYGGIRS---------TYQ 53
            |.|.....||      .|...|....:|.:|:.|    ..|.|..|....:|:         ::.
  Rat    49 DFPSCSFAPK------PAVFSTSWAPVPSQSSVVYHPYGPQPHLGADTRYMRTWLEPLSGAVSFP 107

  Fly    54 HFGPQGG-----QDSGFPSPRSALGYPFPPMHQNSYSGYHLGS------YAPPCASPPKDDFSIS 107
            .| |.||     :...:|..|:..|    |....||..|..||      .||.....|:.|....
  Rat   108 SF-PAGGRHYALKPDAYPGRRADCG----PGDGRSYPDYMYGSPGELRDRAPQTLPSPEADALAG 167

  Fly   108 DKCEDSGLRVNGK--------GKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLT 164
            .|.::....::..        .:..||.|..|:..|..:|.:.|....||....|.|:|..|.||
  Rat   168 SKHKEEKADLDPSNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLT 232

  Fly   165 QTQVKIWFQNRRSKYKKMMK 184
            :.||||||||||.|.|||.|
  Rat   233 ERQVKIWFQNRRMKMKKMNK 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeodomain	125..181	CDD:459649	26/55 (47%)
Hoxc9	NP_001094377.1	Hox9_act	1..179	CDD:461369	31/140 (22%)
		Homeodomain	193..241	CDD:459649	20/47 (43%)