DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Hlx

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001071142.1 Gene:Hlx / 364069 RGDID:1311961 Length:476 Species:Rattus norvegicus


Alignment Length:328 Identity:84/328 - (25%)
Similarity:126/328 - (38%) Gaps:84/328 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 APHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFG---PQGGQDSGFPS 67
            |...||..: |||...:|..:.                  || |.|..|..   |..||......
  Rat   181 AEFDPKVKE-GNTLRDLTSLLT------------------GG-RPTGVHLAGLQPSAGQFFASLD 225

  Fly    68 P---RSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRT 129
            |   .||:..|.....:||.......::..|.|...||....:.|            :|....|.
  Rat   226 PISEASAILSPLSSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYK------------RKRSWSRA 278

  Fly   130 IYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK--KMMKAAQGPGTN 192
            ::|:||.:.|.:||:..:|:..|:|.:|||.||||..|||:||||||.|::  |..:|.:.....
  Rat   279 VFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKE 343

  Fly   193 SGMPLGGGGPNPG---QHSPNQ-------------------------------MHSGEL----AN 219
            :|....||.|..|   :.||::                               :|...:    |.
  Rat   344 AGEKPSGGVPAEGEREERSPSRSEGEAESESSDSESLDMAPSDTERTEGTERSLHQTTVIKASAA 408

  Fly   220 GRFLWAALETNG------TLALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFPP 278
            |..:.|:...:|      :.:.:.|:.|:.|..|:.||....|.|.|.|:.:|.|.|....:.|.
  Rat   409 GALITASSSASGSSFSFSSSSSLGSSNGSAGSASSLGSNCSELLPSHQPSVTSGPQSPEIAQVPL 473

  Fly   279 TGL 281
            .||
  Rat   474 AGL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 27/57 (47%)
HlxNP_001071142.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..170
Homeodomain 270..330 CDD:459649 29/71 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..401 10/72 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..476 16/62 (26%)
Blue background indicates that the domain is not in the aligned region.

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