DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and unpg

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:277 Identity:73/277 - (26%)
Similarity:102/277 - (36%) Gaps:88/277 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYG---------------------G 47
            |..||.|.:.    ....:.|.:..|..:.|:.... ||||..                     .
  Fly   131 PPPPHPPTHA----LEKQLPPTLPHPLDTRFLPFNP-AAAGVAPTDLSYRRLAELMNQDYVHSLS 190

  Fly    48 IRSTYQHFGPQGGQDSGFPSPRSA-LGYPFPPMHQNSYSGYHLGSYAP--PCASPPKD-DFSIS- 107
            :.:..||....|.......:|..| |..|.||...:|.:  ..||::|  |......| ||..| 
  Fly   191 VHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPA--KSGSHSPMEPALDVGMDEDFECSG 253

  Fly   108 DKCEDSGLRV-----NGK---------------------------------GK-----------K 123
            |.|.|..|.:     ||:                                 ||           |
  Fly   254 DSCSDISLTMSPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSK 318

  Fly   124 MRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQG 188
            .|:.||.::|.||.:|.|.|...:||:|.||:::|.||.|::.||||||||||:|:|::......
  Fly   319 SRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGLTS 383

  Fly   189 PGTNSGMPLGGGGPNPG 205
            .|      ||..|...|
  Fly   384 HG------LGRNGTTSG 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 29/55 (53%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 27/51 (53%)

Return to query results.
Submit another query.