DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and pnx

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_840087.1 Gene:pnx / 352939 ZFINID:ZDB-GENE-030328-42 Length:182 Species:Danio rerio


Alignment Length:137 Identity:43/137 - (31%)
Similarity:66/137 - (48%) Gaps:36/137 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PCASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAA 159
            |..:.|..:.|..:....|..:|     |.::.||.::..||:.|.|.||.:.||::.||..:|:
Zfish    43 PKTTSPTQEPSAPNIANASAAKV-----KSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCIAS 102

  Fly   160 SLGLTQTQVKIWFQNRRSKYKKMMKAAQGPGTNSGMPLGGGGPN------------------PGQ 206
            :|||::|||||||||||:|:||.:.             |.||..                  ||.
Zfish   103 ALGLSETQVKIWFQNRRTKWKKELD-------------GHGGEEQSHCAPTALTQNPIMYALPGH 154

  Fly   207 HSPNQMH 213
            |:.:.:|
Zfish   155 HANHHVH 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 28/55 (51%)
pnxNP_840087.1 Important for interaction with tle3a. /evidence=ECO:0000269|PubMed:12642490 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..63 4/19 (21%)
Homeodomain 68..124 CDD:459649 28/55 (51%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.