DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and nkx2.7

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571494.1 Gene:nkx2.7 / 30694 ZFINID:ZDB-GENE-990415-179 Length:269 Species:Danio rerio


Alignment Length:277 Identity:76/277 - (27%)
Similarity:120/277 - (43%) Gaps:56/277 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SVTPGI-------NIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGG------QDSGFPSPRSAL 72
            ::.||:       ::|.:|..::..|:..:     ||....:.|:.|      :...|...||:.
Zfish    24 ALNPGVFMGVEQDSVPLQSLQLQCMQNTLS-----RSLDLLYSPEKGIPGEQVKCDDFDIVRSSC 83

  Fly    73 GYPF-PPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRTIYSSLQL 136
            |.|. ..|..|..:..        |   |..|.|.|.|..:: ||...|.:..||||.::|..|:
Zfish    84 GSPTEEEMDANEETSM--------C---PFTDSSYSSKNGET-LREKPKQRLRRKPRVLFSQTQV 136

  Fly   137 QQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQGPGTNSGMPLGGGG 201
            .:|.|||::.:||:.|||..||.:|.||.|||||||||||.|.|:..:       :..:.|.|  
Zfish   137 FELERRFKQQRYLSAPERDHLALALKLTSTQVKIWFQNRRYKCKRQRQ-------DKSLELAG-- 192

  Fly   202 PNPGQHS-PNQMHSGELANGRFLWAALETNGTLALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPS 265
              |.:.: |..:..|:..:|      ...|.|::..:    ||...|...:|.|.   ..:..||
Zfish   193 --PRRVAVPVLVRDGKPCHG------APYNVTVSYPY----NNYYNSYGNNPYHC---NFTSVPS 242

  Fly   266 STPVSELSPEFPPTGLS 282
            ....|::...|....|:
Zfish   243 FANTSQIPNHFVDMNLT 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 32/55 (58%)
nkx2.7NP_571494.1 COG5576 87..210 CDD:227863 49/145 (34%)
Homeodomain 125..181 CDD:459649 32/55 (58%)

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