DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and msx3

DIOPT Version :9

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571347.2 Gene:msx3 / 30526 ZFINID:ZDB-GENE-980526-306 Length:273 Species:Danio rerio


Alignment Length:185 Identity:63/185 - (34%)
Similarity:81/185 - (43%) Gaps:57/185 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GQDSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVNGKGKKM 124
            ||...|    ....|..||.|          |..|||.                 ||   |.|..
Zfish   121 GQSGWF----QTTSYTSPPRH----------SSPPPCT-----------------LR---KHKNN 151

  Fly   125 RKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKM------- 182
            |||||.:::.||..|.|:|::.|||::.||||.:.||.||:|||||||||||:|.|::       
Zfish   152 RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEK 216

  Fly   183 MKAAQGP-----------GTNSGM-PLGGGG---PNPGQHSPNQMHSGELANGRF 222
            :|.|..|           ||:.|. ||.|..   |.|....|. :..|.:..|.:
Zfish   217 LKLATKPLLPAFAFPFPLGTHVGSPPLYGPSSSFPRPALPVPG-LFGGPVTYGMY 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeobox 127..180 CDD:278475 31/52 (60%)
msx3NP_571347.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..159 20/71 (28%)
Homeobox 154..207 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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