DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and rx1

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571300.2 Gene:rx1 / 30472 ZFINID:ZDB-GENE-990415-236 Length:330 Species:Danio rerio


Alignment Length:309 Identity:77/309 - (24%)
Similarity:113/309 - (36%) Gaps:100/309 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GGQDSGFPSPRSALGYPF---PPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCE--------- 111
            ||:..|.|........|:   ||:..        ||..|..    .|....|:||:         
Zfish    65 GGESLGEPGKLDQRVQPYGHLPPLRD--------GSEQPTF----HDADMFSNKCDGDLGDLRKA 117

  Fly   112 ---DSGLRVNGKG----KKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVK 169
               ||....:..|    ||.|:.||.:::.||.:|.|.|:::.|..:..|.|||..:.|.:.:|:
Zfish   118 IESDSKSPDSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 182

  Fly   170 IWFQNRRSKYKKM----------------------MKAAQGPGTNSGMPLGGGGPNP-GQHSPNQ 211
            :||||||:|:::.                      |....||..|| :||....|:| ...:|  
Zfish   183 VWFQNRRAKWRRQEKIDASTMKLHDSPMLSFNRPSMHPTVGPMNNS-LPLDPWLPSPLSSATP-- 244

  Fly   212 MHSGELANGRFLWAALETNGTLALVHSTGGNNG--GGSNSGSPSH-YLPPGHSPTPSSTPVSELS 273
                                    |||..|..|  .|..:|.|.| :|.|   |.|.:..:..::
Zfish   245 ------------------------VHSIPGFMGPTQGLQTGYPGHSFLSP---PQPMAQSMQPMA 282

  Fly   274 PEFPPTGLSPPTQAPWDQKPHWIDHKPPPQMTPQPPHPAATLHPQTHHH 322
            |        ||.|.|    |.:.| |.|.:...|.....|.|..:...|
Zfish   283 P--------PPYQCP----PPFTD-KYPLEDVDQRSSSIAALRMKAKEH 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 22/55 (40%)
rx1NP_571300.2 Octapeptide motif 37..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..104 10/49 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..142 6/23 (26%)
Homeodomain 138..194 CDD:459649 22/55 (40%)
OAR 302..318 CDD:461067 3/15 (20%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319 3/13 (23%)
Nuclear localization signal. /evidence=ECO:0000255 312..316 0/3 (0%)
Blue background indicates that the domain is not in the aligned region.

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