DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and hoxa10b

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571230.2 Gene:hoxa10b / 30391 ZFINID:ZDB-GENE-990415-97 Length:347 Species:Danio rerio


Alignment Length:140 Identity:41/140 - (29%)
Similarity:62/140 - (44%) Gaps:11/140 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 STYQHFGPQGGQDSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSIS----DKC 110
            |:......:..:|.....|..|   |..|.......|....:.:|.....|:...:::    .|.
Zfish   200 SSLSAIAAEASRDESDEPPTCA---PCAPGRNKELRGSTGTASSPEPPDSPEKAVTVTKAGDSKS 261

  Fly   111 EDSGLRVNGK-GKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQN 174
            |.:...:..| |:|.|.|.|.:.:|:|:   :.|....||....|.|::.|:.||..||||||||
Zfish   262 ESTANWLTAKSGRKKRCPYTKHQTLELE---KEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQN 323

  Fly   175 RRSKYKKMMK 184
            ||.|.|||.:
Zfish   324 RRMKLKKMSR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 24/55 (44%)
hoxa10bNP_571230.2 Homeodomain 274..330 CDD:459649 25/58 (43%)

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