DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and hoxa11b

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571222.1 Gene:hoxa11b / 30382 ZFINID:ZDB-GENE-990415-4 Length:283 Species:Danio rerio


Alignment Length:110 Identity:40/110 - (36%)
Similarity:55/110 - (50%) Gaps:21/110 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SYAPPCASPPKDDFSISD---KCED---------------SGLRVNGKGKKMRKPRTIYSSLQLQ 137
            |.|||.|....|....:|   :||:               ||   :..|:|.||.|..|:..|::
Zfish   163 SKAPPPAESGSDSCRGTDETERCEETSSPEPSSGNNEDKFSG---SSNGQKTRKKRCPYTKYQIR 224

  Fly   138 QLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKM 182
            :|.|.|..:.|:...:|.:|:..|.||..||||||||||.|.||:
Zfish   225 ELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKL 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 25/55 (45%)
hoxa11bNP_571222.1 DUF3528 26..151 CDD:432284
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..215 15/54 (28%)
Homeodomain 212..268 CDD:459649 25/55 (45%)
Blue background indicates that the domain is not in the aligned region.

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