DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and hoxb9a

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_571196.2 Gene:hoxb9a / 30344 ZFINID:ZDB-GENE-990415-109 Length:249 Species:Danio rerio


Alignment Length:239 Identity:61/239 - (25%)
Similarity:74/239 - (30%) Gaps:100/239 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFPSPRSALGYPFPPMHQNSYSG------- 86
            |..|.|..:|      |...|.      |..|:...||   |....|.||:..:|:|.       
Zfish    23 PNASRFSNVQ------YSSARQ------PGPGEHPEFP---SCSFQPKPPVFSSSWSPFSSHASN 72

  Fly    87 -----YHLGSYAP----------------PCA----------------------SPPK------- 101
                 ||  .|.|                .||                      .|||       
Zfish    73 GLPAVYH--PYIPTQPVPSTDTRYLRTWLDCAPRAEPLPGQGQVKMEPLLGHLGEPPKLVGQHEY 135

  Fly   102 -------------------DDFSISDKCED-SGLRVNG------KGKKMRKPRTIYSSLQLQQLN 140
                               |:..|.:..|| .|...|.      ..:..||.|..|:..|..:|.
Zfish   136 ILESSTAREINSGHSAGFEDNKDICEGSEDKEGPDQNDPSANWLHARSSRKKRCPYTKYQTLELE 200

  Fly   141 RRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMK 184
            :.|....||....|.|:|..|.||:.||||||||||.|.|||.|
Zfish   201 KEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 26/55 (47%)
hoxb9aNP_571196.2 Hox9_act 1..171 CDD:461369 30/164 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..182 6/35 (17%)
Homeodomain 185..241 CDD:459649 26/55 (47%)

Return to query results.
Submit another query.