Protein Alignment Dll and hoxd4a

DIOPT Version :10

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_001119917.1
• Gene: hoxd4a / 30329
• ZFINID: ZDB-GENE-980526-214
• Length: 256
• Species: Danio rerio
• Alignment Length: 215
• Identity: 51/215 - (23%)
• Similarity: 91/215 - (42%)
• Gaps: 58/215 - (26%)

  Fly     5 DAPHTPKYMDGGNTAASVTPGINIPGKSAF-----VELQQHAAAGYGGIRSTYQHFGPQGGQ--- 61
            :.|::...:.|    :||.|..::..:::.     .:.:|..|....|.|:        |||
Zfish    78 EQPYSCSTVQG----SSVQPRGHVQDQASTPSPFPAQTEQCPAVQISGSRT--------GGQQQN 130

  Fly    62 ---DSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVNGKGKK 123
               .:|.|:.:.|:.||:       ....|:.:..|        |::               |.:
Zfish   131 TKTQNGIPTKQPAVVYPW-------MKKVHVTTVNP--------DYT---------------GPE 165

  Fly   124 MRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQG 188
            .::.||.|:..|:.:|.:.|...:||....|.|:|.:|.|::.|:||||||||.|:||..|....
Zfish   166 PKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNT 230

  Fly   189 PGTNSGMPLGGGGPNPGQHS 208
            .|.::.:     |....||:
Zfish   231 KGRSASV-----GNQHAQHA 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeodomain	125..181	CDD:459649	23/55 (42%)
hoxd4a	NP_001119917.1	Homeodomain	167..223	CDD:459649	23/55 (42%)