DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and Pitx3

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_062120.1 Gene:Pitx3 / 29609 RGDID:3332 Length:302 Species:Rattus norvegicus


Alignment Length:253 Identity:74/253 - (29%)
Similarity:106/253 - (41%) Gaps:47/253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 FGPQGGQDSGFPS-PRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVN 118
            ||..|..::..|: ..|..|.|.||:.::...|..........||.|      ....||..|:  
  Rat     3 FGLLGEAEARSPALSLSDAGTPHPPLPEHGCKGQEHSDSEKASASLP------GGSPEDGSLK-- 59

  Fly   119 GKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMM 183
               ||.|:.||.::|.|||:|...|||.:|..:..|.|:|....||:.:|::||:|||:|::|..
  Rat    60 ---KKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRE 121

  Fly   184 KAAQGPGTNSGM--PLGGGGP-----NPGQ---HSPNQMHSGELANGRFLWAALETN-GTLALVH 237
            ::.|......|.  ||||..|     .||.   :.|.:..:..||...|.:|....| |.||   
  Rat   122 RSQQAELCKGGFAAPLGGLVPPYEEVYPGYTYGNWPPKALAPPLAAKTFPFAFNSVNVGPLA--- 183

  Fly   238 STGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFPP-------TGLSPPTQAP 288
                         |...:.||. |...|..|.:..:|...|       .|.:||..||
  Rat   184 -------------SQPVFSPPS-SIAASMVPSAAAAPGTVPGPGALQGLGGAPPGLAP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 24/55 (44%)
Pitx3NP_062120.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 21/78 (27%)
Homeodomain 63..119 CDD:459649 24/55 (44%)
PTZ00395 <142..>236 CDD:185594 25/103 (24%)
OAR 258..275 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 262..275
Nuclear localization signal. /evidence=ECO:0000255 268..272
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.