DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and Meox2

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_058845.2 Gene:Meox2 / 29279 RGDID:3079 Length:303 Species:Rattus norvegicus


Alignment Length:197 Identity:61/197 - (30%)
Similarity:81/197 - (41%) Gaps:45/197 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDF-------------SISDKCEDS 113
            |||.|   ..||...|.:..||.|   |||..|..|:....|:             |.|.:..||
  Rat   112 DSGGP---PELGSSPPVLCSNSSS---LGSSTPTGAACAPGDYGRQALSPAEVEKRSGSKRKSDS 170

  Fly   114 GLRVNGKGK-----KMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQ 173
            .....|..|     |.||.||.::..|:::|...|....||....|.|:|.:|.||:.|||:|||
  Rat   171 SDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQ 235

  Fly   174 NRRSKYKKMMKAAQG------------PGTNSGMPLGGGGPNPGQHSPNQM---------HSGEL 217
            |||.|:|::....||            .||.....|.|.|....|.:.:.:         ||.|.
  Rat   236 NRRMKWKRVKGGQQGAAAREKELVNVKKGTLLPSELSGIGAATLQQTGDSLANDDSRDSDHSSEH 300

  Fly   218 AN 219
            |:
  Rat   301 AH 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 25/55 (45%)
Meox2NP_058845.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..191 25/84 (30%)
Homeodomain 187..243 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..303 5/24 (21%)

Return to query results.
Submit another query.