Protein Alignment Dll and Hoxd4

DIOPT Version :10

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 246
• Identity: 64/246 - (26%)
• Similarity: 90/246 - (36%)
• Gaps: 66/246 - (26%)

  Fly     4 PDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQ--------HFG--PQ 58
            |..|...:|:.||                 ::..|.....|.|...|.:|        .||  |.
  Rat    15 PKFPPCEEYLQGG-----------------YLGEQGADYYGSGAQGSDFQPPGLYPRPDFGEQPF 62

  Fly    59 GGQDSGFPSPRSAL---GYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCED-------- 112
            ||   |.|.|.|||   |:...|    |..|.|..:...||.:||......:..|..
  Rat    63 GG---GGPGPGSALPARGHGQEP----SGPGSHYSAPGEPCPAPPPAPLPGARACSQPTGPKQPP 120

  Fly   113 --------------------SGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAEL 157
                                :.:..|..|.:.::.||.|:..|:.:|.:.|...:||....|.|:
  Rat   121 PGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEI 185

  Fly   158 AASLGLTQTQVKIWFQNRRSKYKKMMKAAQGPGTNSGMPLG-GGGPNPGQH 207
            |.:|.|::.|:||||||||.|:||..|.....|.:|..... .....|.||
  Rat   186 AHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAAPSQH 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeodomain	125..181	CDD:459649	23/55 (42%)
Hoxd4	NP_001099355.1	Homeodomain	153..209	CDD:459649	23/55 (42%)