Protein Alignment Dll and ind

DIOPT Version :10

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 280
• Identity: 72/280 - (25%)
• Similarity: 96/280 - (34%)
• Gaps: 98/280 - (35%)

  Fly    19 AASVTPGI-NIPGKSAFV-----------------ELQQHAAAGYGGIRST---YQHFGPQGGQD 62
            ||::.|.| .:|..:::|                 :.||||||......:.   .||  |.....
  Fly    39 AAAMLPSIPMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAALQQH--PHVSSS 101

  Fly    63 SG---------FPSPRSALG-------YPFPPMH-----------QNSYSGYHLGSYAPP----- 95
            .|         |.|.|.:.|       ||.||:.           .|.|....:|....|
  Fly   102 PGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSF 166

  Fly    96 CASPPKDDFSISDKC----EDSGLR----------------------------VNGKGKKMRKPR 128
            |.||.....:..|..    |..|.|                            :|......::.|
  Fly   167 CTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIR 231

  Fly   129 TIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQGP---- 189
            |.::|.||.:|.|.|....||:...|.|:|..|.|::.||||||||||.|.||  ..::.|
  Fly   232 TAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK--GGSESPTFNL 294

  Fly   190 GTNSGMPLGGGGPNPGQHSP 209
            .|||     .|.|.....||
  Fly   295 STNS-----NGSPQASPVSP 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeodomain	125..181	CDD:459649	26/55 (47%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	26/55 (47%)