DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Rax

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_038861.2 Gene:Rax / 19434 MGIID:109632 Length:342 Species:Mus musculus


Alignment Length:288 Identity:81/288 - (28%)
Similarity:109/288 - (37%) Gaps:85/288 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PQGGQDSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPC------ASPPKDDFSISDKCEDSGL 115
            |.||.:|   ||.:|.|  |.|.::.:          .||      .:.|....|:.....||.|
Mouse    77 PAGGSES---SPPAAPG--FVPEYEAT----------RPCYPKEQGEARPSPGLSVGPAAGDSKL 126

  Fly   116 -RVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKY 179
             ......||.|:.||.:::.||.:|.|.|:::.|..:..|.|||..:.|.:.:|::||||||:|:
Mouse   127 SEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKW 191

  Fly   180 KKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETNGTLALVHSTGGNNG 244
            ::..|...     |.|.|        |.||....|....:     :||...||           |
Mouse   192 RRQEKLEV-----SSMKL--------QDSPLLSFSRSPPS-----SALAPLGT-----------G 227

  Fly   245 GGSNSGSPSHYLP---------PGHSPTP-SSTPVSELSPEFPPTGLSPPTQAPWDQKPHWIDHK 299
            .||.||.|...||         ||...|. .|.|           |..||.|.            
Mouse   228 PGSGSGPPGSALPLEPWLGPPLPGGGATALQSLP-----------GFGPPGQG------------ 269

  Fly   300 PPPQMTPQPPH-PAATLHPQTHHHNPPP 326
            .|...||.||. .:|.|.|......|||
Mouse   270 LPASYTPPPPFLNSAPLGPGLQQLGPPP 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 22/55 (40%)
RaxNP_038861.2 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..140 20/77 (26%)
Homeodomain 137..193 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..295 31/125 (25%)
OAR 316..331 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 319..332
Nuclear localization signal. /evidence=ECO:0000255 325..329
Blue background indicates that the domain is not in the aligned region.

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