DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and ceh-19

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001023142.1 Gene:ceh-19 / 177590 WormBaseID:WBGene00000442 Length:199 Species:Caenorhabditis elegans


Alignment Length:109 Identity:43/109 - (39%)
Similarity:60/109 - (55%) Gaps:24/109 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SPPKDDFSISDK--CEDSGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAAS 160
            |..|.|:..|.|  ||             ||||..||:.||.:|...||..:||::.:|.:|:.:
 Worm    79 SARKHDYKRSRKSVCE-------------RKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQT 130

  Fly   161 LGLTQTQVKIWFQNRRSKYKK--------MMKAAQGPGTNSGMP 196
            |.||:||:|.||||||:|:||        |:|.|. ..|:.|:|
 Worm   131 LNLTETQIKTWFQNRRTKWKKQLTSSIRQMVKDAP-TSTSVGVP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 28/55 (51%)
ceh-19NP_001023142.1 Homeodomain 95..151 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.