DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Msx2

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus


Alignment Length:172 Identity:67/172 - (38%)
Similarity:87/172 - (50%) Gaps:38/172 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GGQDSGFPSPRSALGYPFPP---MHQNSYSG----YHLGSYAPP--CASPPKDDFSISDKCEDSG 114
            |.:|:..|.|   |..||..   ..:||..|    ...|.|:||  ..||        ..|.   
Mouse    85 GVRDAHSPGP---LVKPFETASVKSENSEDGAPWIQEPGRYSPPPRHMSP--------TTCT--- 135

  Fly   115 LRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKY 179
            ||   |.|..|||||.:::.||..|.|:|::.|||::.||||.::||.||:|||||||||||:|.
Mouse   136 LR---KHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKA 197

  Fly   180 KKM-------MKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHS 214
            |::       :|.|..|...||..|    |.| .:||.|..|
Mouse   198 KRLQEAELEKLKMAAKPMLPSGFSL----PFP-INSPLQAAS 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 33/55 (60%)
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 9/35 (26%)
Homeodomain 143..199 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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