DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Hoxd3

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_034598.2 Gene:Hoxd3 / 15434 MGIID:96207 Length:433 Species:Mus musculus


Alignment Length:362 Identity:89/362 - (24%)
Similarity:123/362 - (33%) Gaps:120/362 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFPSP 68
            |..|..|       .::...||..:|.|..           .||:.::               |.
Mouse   122 PPPPTLP-------PSSPTNPGSGVPAKKT-----------KGGLSAS---------------SS 153

  Fly    69 RSALGYP-FPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRTIYS 132
            .|.:... ||.|.::..:.....|    ||:.       .:.|||.    :..|...::.||.|:
Mouse   154 SSTISKQIFPWMKESRQNSKQKNS----CATS-------GENCEDK----SPPGPASKRVRTAYT 203

  Fly   133 SLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKA------AQGPGT 191
            |.||.:|.:.|...:||..|.|.|:|..|.||:.|:||||||||.||||..||      ..|...
Mouse   204 SAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPAGQSP 268

  Fly   192 NSGMPLGGG-------------------GPNPGQHSPNQMHSGELA------------NGRFLWA 225
            ....||||.                   .|:|...:.:|.:...||            ..|:...
Mouse   269 ERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCLPQQKRYPAP 333

  Fly   226 ALETNGTLALVHSTGGNNGGGSNS---GSPSHYLPPGHSPTPSSTPVSELSPEFPPTGLSPPTQA 287
            ..|.       |....|.||.:::   |||.:.   |.:...|..|.|  .|.|....||.|:.|
Mouse   334 EFEP-------HPMASNGGGFASANLQGSPVYV---GGNFVDSMAPTS--GPVFNLGHLSHPSSA 386

  Fly   288 PWDQKPHWIDHKPPPQMTPQPPHPAATLHPQTHHHNP 324
            ..|                   :..|...|..|||.|
Mouse   387 SVD-------------------YSCAAQIPGNHHHGP 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 28/55 (51%)
Hoxd3NP_034598.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..198 21/123 (17%)
Antp-type hexapeptide 161..166 2/4 (50%)
Homeodomain 196..252 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..280 5/21 (24%)
DUF4074 370..431 CDD:463833 14/56 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..433 3/4 (75%)

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