DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Hoxa9

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_034586.1 Gene:Hoxa9 / 15405 MGIID:96180 Length:271 Species:Mus musculus


Alignment Length:200 Identity:61/200 - (30%)
Similarity:81/200 - (40%) Gaps:46/200 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFPSP 68
            |.||......||....:.:.|   .||           |..:.|:.|:    .|.|.:    |.|
Mouse    93 PQAPVAAAAPDGRYMRSWLEP---TPG-----------ALSFAGLPSS----RPYGIK----PEP 135

  Fly    69 RSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKD--------DFSISDKCEDSG-----LRVNG- 119
            .||.....|.:..::.|   |..||  |.|||.|        .||.::...:||     :..|. 
Mouse   136 LSARRGDCPTLDTHTLS---LTDYA--CGSPPVDREKQPSEGAFSENNAENESGGDKPPIDPNNP 195

  Fly   120 -----KGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKY 179
                 ..:..||.|..|:..|..:|.:.|....||....|.|:|..|.||:.||||||||||.|.
Mouse   196 AANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKM 260

  Fly   180 KKMMK 184
            ||:.|
Mouse   261 KKINK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 26/55 (47%)
Hoxa9NP_034586.1 Hox9_act 1..192 CDD:461369 31/125 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..197 12/44 (27%)
Homeodomain 206..262 CDD:459649 26/55 (47%)

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