DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Hmx3

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_032283.3 Gene:Hmx3 / 15373 MGIID:107160 Length:356 Species:Mus musculus


Alignment Length:248 Identity:66/248 - (26%)
Similarity:90/248 - (36%) Gaps:67/248 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PQGGQDSGFPSPRSALGYPFPPMHQ---------------NSYSGYHLGSYAPPCASPPKDDFSI 106
            |..|.|...|.|.    ....|.|:               :|..|...|...|..|.......:.
Mouse   145 PASGTDRDSPEPL----LKADPDHKELDSKSPDEIILEESDSEEGKKEGEAVPGAAGTTVGATTA 205

  Fly   107 SDKCEDSGLRVNGKGKK----MRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQ 167
            :...||.........||    .:|.||::|..|:.||...|...:||:..|||.|||||.||:||
Mouse   206 TPGSEDWKAGAESPEKKPACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQ 270

  Fly   168 VKIWFQNRRSKYKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETNGT 232
            |||||||||:|:|:.:.|                         ::.:..|::.    ||......
Mouse   271 VKIWFQNRRNKWKRQLAA-------------------------ELEAANLSHA----AAQRIVRV 306

  Fly   233 LALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFP-PTGLSPP 284
            ..|.|......|..:.:|:|              .|||:....|| |...|.|
Mouse   307 PILYHENSAAEGAAAAAGAP--------------VPVSQPLLTFPHPVYYSHP 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 32/55 (58%)
Hmx3NP_032283.3 Homeodomain 228..284 CDD:459649 32/55 (58%)

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