DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and Gsx1

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_032204.1 Gene:Gsx1 / 14842 MGIID:95842 Length:261 Species:Mus musculus


Alignment Length:227 Identity:67/227 - (29%)
Similarity:90/227 - (39%) Gaps:56/227 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFP----SPRSA--------LGYPFPPMHQ 81
            ||..|...|:    |.:....|.|.| .|.|.|.|..|    .|.:|        ..||.|...|
Mouse    71 PGPPALPLLK----ASFPPFGSQYCH-APLGRQHSVSPGVAHGPAAAAAAAALYQTSYPLPDPRQ 130

  Fly    82 NSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRT 146
                 :|       |.|            .||........|:|   ||.::|.||.:|.|.|...
Mouse   131 -----FH-------CIS------------VDSSSNQLPSSKRM---RTAFTSTQLLELEREFASN 168

  Fly   147 QYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQ 211
            .||:...|.|:|..|.|::.||||||||||.|:||     :|.|:|.   .||.|...|..:|..
Mouse   169 MYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKK-----EGKGSNH---RGGAGAGAGGGAPQG 225

  Fly   212 MHSGELANGRFLWAALETNGTLALVHSTGGNN 243
            .....|::.:    ..|.:..|.:..|:.|.:
Mouse   226 CKCSSLSSAK----CSEDDDELPMSPSSSGKD 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 26/55 (47%)
Gsx1NP_032204.1 SNAG domain. /evidence=ECO:0000250 1..20
Homeodomain 147..203 CDD:459649 28/58 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..261 15/65 (23%)
Blue background indicates that the domain is not in the aligned region.

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