DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and gbx1

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_777286.1 Gene:gbx1 / 142985 ZFINID:ZDB-GENE-020117-2 Length:316 Species:Danio rerio


Alignment Length:236 Identity:61/236 - (25%)
Similarity:93/236 - (39%) Gaps:48/236 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DAPDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFP 66
            |.||:.:.|:.|.|....|..| |:|                     |....|...:|.:...|.
Zfish    96 DPPDSFYPPQEMPGPRLGADGT-GMN---------------------RQESPHDELKGSELLNFT 138

  Fly    67 SPRSALGYPFPPMHQNSYSGYHLGSYAPPC-------ASPPKDDFSISDKC------------ED 112
            ....|:... ..::.:......|.:....|       |....:.||..:.|            ..
Zfish   139 ETFQAVAGE-TKLYSSDDEKLDLKAAEAACSDREDSSADSENESFSDGNTCASASQKGKLKGGSQ 202

  Fly   113 SGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRS 177
            ..|...|...|.|:.||.::|.||.:|.:.|...:||:|.||:::|.:|.|::.||||||||||:
Zfish   203 DALPPGGSAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA 267

  Fly   178 KYKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELA 218
            |:|::  .|......||.|:    .||....|..:|....|
Zfish   268 KWKRI--KAGNVNNRSGEPV----RNPKIVVPIPVHVNRFA 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 27/55 (49%)
gbx1NP_777286.1 Homeodomain 215..271 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.