DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and Cdx4

DIOPT Version :9

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_031700.1 Gene:Cdx4 / 12592 MGIID:88362 Length:282 Species:Mus musculus


Alignment Length:280 Identity:75/280 - (26%)
Similarity:106/280 - (37%) Gaps:106/280 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ASVTPG-INIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFPSPRS----ALGYP---- 75
            |.:.|| :..||.|        :.||          .|..||  ||.|.|.|    |..||    
Mouse    11 AGMYPGTLRSPGGS--------STAG----------VGTSGG--SGSPLPASNFTAAPVYPHYVG 55

  Fly    76 FPPMHQNSYSGYHLGSYAPPCASPPKDDF------------------------------------ 104
            :|.|......|..||:::.| .|||::|:                                    
Mouse    56 YPHMSNMDPHGPSLGAWSSP-YSPPREDWSTYPGPPSTMGTVPMNDMTSPVFGSPDYSTLGPTSG 119

  Fly   105 -----SISDKCE------DSG---------------------LRVNGKGKKMRKPRTIYSSLQLQ 137
                 |:.|...      |||                     ::|.||.:...|.|.:|:..|..
Mouse   120 ASNGGSLPDAASESLVSLDSGTSGATSPSRSRHSPYAWMRKTVQVTGKTRTKEKYRVVYTDHQRL 184

  Fly   138 QLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQGPGTNSGMPLGGGGP 202
            :|.:.|...:|:.:..::|||.:|||::.||||||||||:|.:||:|.......|:|   |....
Mouse   185 ELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQFENTG---GSVQS 246

  Fly   203 NPGQHSPNQMHSGELANGRF 222
            :.|..||     |||.|..|
Mouse   247 DSGSISP-----GELPNAFF 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeobox 127..180 CDD:278475 23/52 (44%)
Cdx4NP_031700.1 Caudal_act 13..160 CDD:309740 33/167 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 13..36 10/42 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..156 5/57 (9%)
Homeobox 175..227 CDD:306543 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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