Protein Alignment Dll and Cdx1

DIOPT Version :9

• Sequence 1: NP_001137759.1
• Gene: Dll / 37973
• FlyBaseID: FBgn0000157
• Length: 347
• Species: Drosophila melanogaster
• Sequence 2: NP_034010.3
• Gene: Cdx1 / 12590
• MGIID: 88360
• Length: 268
• Species: Mus musculus
• Alignment Length: 289
• Identity: 79/289 - (27%)
• Similarity: 107/289 - (37%)
• Gaps: 72/289 - (24%)

  Fly     6 APHTPKYMD-GGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGGQDS----GF 65
            ||..|:|.| .|.|.....|.......:.|...:...||.||.        ||.....|    .|
Mouse    36 APAPPQYPDFAGYTHVEPAPAPPPTWAAPFPAPKDDWAAAYGP--------GPTASAASPAPLAF 92

  Fly    66 PSPRSALGYPFPPMHQNSYSGYHLGSYAPPCA--SPPKDDFS-ISDKCEDSGLRVNGKGKKMRKP 127
            ..|......|.||..........||:...|.:  :|.:..:. :......:|...:||.:...|.
Mouse    93 GPPPDFSPVPAPPGPGPGILAQSLGAPGAPSSPGAPRRTPYEWMRRSVAAAGGGGSGKTRTKDKY 157

  Fly   128 RTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYKKMMKAAQG---- 188
            |.:|:..|..:|.:.|..::|:.:..::||||:||||:.||||||||||:|.:|:.|..|.
Mouse   158 RVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQP 222

  Fly   189 -PGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETNGTLALVHSTGGNNGGGSNSGSP 252
             |.|...:|| .|.|.|                                            ||.|
Mouse   223 LPPTQLPLPL-DGTPTP--------------------------------------------SGPP 242

  Fly   253 SHYLPP---GHSPTPSSTPVSELSPEFPP 278
            ...|.|   |...|||..||.|   ||.|
Mouse   243 LGSLCPTNAGLLGTPSPVPVKE---EFLP 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dll	NP_001137759.1	Homeobox	127..180	CDD:278475	25/52 (48%)
Cdx1	NP_034010.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..152		28/123 (23%)
		Caudal_act	13..138	CDD:282574	25/109 (23%)
		Interaction with DNA. /evidence=ECO:0000250|UniProtKB:P47902	157..178		5/20 (25%)
		Homeobox	158..210	CDD:278475	25/51 (49%)
		Interaction with 5-mCpG DNA. /evidence=ECO:0000250|UniProtKB:P47902	196..207		9/10 (90%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	209..268		24/106 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900