DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and prrx2

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:XP_002940803.1 Gene:prrx2 / 100488907 XenbaseID:XB-GENE-947362 Length:248 Species:Xenopus tropicalis


Alignment Length:255 Identity:63/255 - (24%)
Similarity:99/255 - (38%) Gaps:69/255 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SAFVELQQHAAAGYGGIRSTYQHFGPQGGQDSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPC 96
            |..::|::.||    |:::|.....|...:|....|..|:          :|....|.|....| 
 Frog    34 SHLLDLEEAAA----GMQTTADMAAPTEDEDKEPASGGSS----------DSEVTIHEGGSPNP- 83

  Fly    97 ASPPKDDFSISDKCEDSGLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASL 161
                            |..:.:|| ||.|:.||.::|.|||.|.|.|:||.|.....|.:||..:
 Frog    84 ----------------SSNKSSGK-KKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRV 131

  Fly   162 GLTQTQVKIWFQNRRSKYKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAA 226
            .|::.:|::||||||:|:::..:|..  .:.|...|.....:.|........:..|......|  
 Frog   132 SLSEARVQVWFQNRRAKFRRNERAML--ASRSATHLKSYSQDTGAEQQVSPRASTLTPEYMPW-- 192

  Fly   227 LETNGTLALVHSTGGNNGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFPPTGLSPPTQ 286
                               .|||...:..||| :|||.::|..:             |||
 Frog   193 -------------------NSNSNYSNASLPP-YSPTTTATSTA-------------PTQ 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 25/55 (45%)
prrx2XP_002940803.1 Homeodomain 95..151 CDD:459649 25/55 (45%)

Return to query results.
Submit another query.