DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll and nkx2-1

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:XP_002935383.1 Gene:nkx2-1 / 100135015 XenbaseID:XB-GENE-485985 Length:346 Species:Xenopus tropicalis


Alignment Length:335 Identity:86/335 - (25%)
Similarity:119/335 - (35%) Gaps:118/335 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ASVTPGINIPGKSAF-------VELQQHAAAGYGGIRSTYQHFGPQGGQDSGFPSPRSALGYPFP 77
            |..:.|:..|..:|:       ..:|||.....|.:.:.| |....|                .|
 Frog    28 AMESAGLGAPLSAAYRQSQVSQASMQQHGMGHNGPVSAAY-HMTAAG----------------VP 75

  Fly    78 PMHQNSYSGY---HLGSYAPPCASPPKDD------------------FSISDKC--EDSGLRVNG 119
            .:...:..||   :||:.......||..|                  ||...:.  ..||:.:.|
 Frog    76 QLSHTTMGGYCNGNLGNLGNMSELPPYQDTMRNSSATGWYGANPDPRFSTISRFMGPSSGMNMGG 140

  Fly   120 ---------KGKKM--------RKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQ 167
                     .||.|        ||.|.::|..|:.:|.|||::.:||:.|||..||:.:.||.||
 Frog   141 LGNMGSLGDVGKSMTPLQATPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQ 205

  Fly   168 VKIWFQNRRSKYKKMM--KAA--------------QGPG-------TNSGMPLGGGGPNPGQHSP 209
            |||||||.|.|.|:..  |||              |.|.       ...|.|...|...|     
 Frog   206 VKIWFQNHRYKMKRQAKDKAAQQQMQQDNSSCQQQQSPRRVAVPVLVKDGKPCQAGSNTP----- 265

  Fly   210 NQMHSGELANGRFLWAALETNGTLALVHSTGGNNGGG------SNSGSPSHYLPPGHSPTPSS-- 266
                          .|||:::........|..:||.|      :||...|..|.| ||.:|||  
 Frog   266 --------------TAALQSHQQQTATAITVTSNGLGPHQSHQTNSAGQSPDLVP-HSNSPSSLQ 315

  Fly   267 ---TPVSELS 273
               |.:|.|:
 Frog   316 NQVTSLSHLN 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 29/55 (53%)
nkx2-1XP_002935383.1 Homeodomain 163..219 CDD:459649 29/55 (53%)

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