DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll and emx2

DIOPT Version :10

Sequence 1:NP_001137759.1 Gene:Dll / 37973 FlyBaseID:FBgn0000157 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001128284.1 Gene:emx2 / 100038069 XenbaseID:XB-GENE-481028 Length:247 Species:Xenopus tropicalis


Alignment Length:163 Identity:48/163 - (29%)
Similarity:71/163 - (43%) Gaps:35/163 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDD-----------------FSISDKCEDS 113
            |.|.:...:|.|..|          |..|..||..:|.                 |..:|...:|
 Frog    84 PPPHALAAHPLPTSH----------SPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSAES 138

  Fly   114 GLRVNGKGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 178
            .|..|...:|.::.||.:|..||.:|...|::..|:...||.:||.||.||:||||:||||||:|
 Frog   139 FLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTK 203

  Fly   179 YKKMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQ 211
            :|:.....:|..::.        ...|.|..|:
 Frog   204 FKRQKLEEEGSDSSQ--------KKKGAHHINR 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DllNP_001137759.1 Homeodomain 125..181 CDD:459649 27/55 (49%)
emx2NP_001128284.1 Homeodomain 150..206 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.