DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc4 and ORC4

DIOPT Version :9

Sequence 1:NP_477320.1 Gene:Orc4 / 37970 FlyBaseID:FBgn0023181 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_178222.4 Gene:ORC4 / 814641 AraportID:AT2G01120 Length:965 Species:Arabidopsis thaliana


Alignment Length:419 Identity:129/419 - (30%)
Similarity:209/419 - (49%) Gaps:51/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRV 98
            |.::.::..:...|.:||:||||||||||..:::.  . ||  :.|.::..::.|:|.||:||..
plant    37 SKLKFIVSTSITEGCNNSMLLLGPRGSGKAAVLDLXXGXLL--EQFPDSVSVIRLNGLLHSDDNC 99

  Fly    99 ALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKAGGKHSKSVIFILEEFDLFCAHHNQTLLYN 163
            |.|.|..|:.:|:........||.:|..|::..|:|.|...|::||:|:|||:| |...|.|||:
plant   100 AFKEIAKQLCMEHHLLFSKMASFDDNSQFIIAMLRACGLAHKTIIFVLDEFDMF-AQGKQRLLYS 163

  Fly   164 -LFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPT 227
             |.|..||..:...|:|::.|||..:||||||:||||||:....|..|  |:...|...|||||.
plant   164 XLDDAMQSVTSQAVVVGISSRLDADQLLEKRVRSRFSHRKFLFLPPSR--EELDGLFVHLLSLPA 226

  Fly   228 GNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGFSPRLR----DAWNKQICKVLATQQARSTL 288
            .:             ...||  |.||         |:.:::    |...|.|.|.|.  .|.||:
plant   227 DS-------------GFPSG--YVSR---------FNDKIKNLTSDTRFKDILKTLF--NANSTV 265

  Fly   289 QALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIA 353
                     .::|| |:|..|:.:..:|..::.|...|..|..:...|:|.:...|||||.|::.
plant   266 ---------NSFLK-FIFCAVSLMNLESGLLSLENFKAALSSMQRQPKLEAVRDCSVLELYLLVC 320

  Fly   354 IKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTGGAGGGVG 418
            :: ..::.::.|:||..:...:........|.....:::.|:||||||..::|...........|
plant   321 MR-RLEVKEQSSYNFISVMKEYKAIHDSFHTSDYYAQNVCLRAFEHLRERQVICYAENRGQSQTG 384

  Fly   419 KVQKEFEMHKLALTYSQIHHCMQRYQALP 447
                |:.:.||.::.|::|..|:.:...|
plant   385 ----EYRLQKLLISASELHQGMRSHACCP 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc4NP_477320.1 AAA_16 39..178 CDD:289934 51/139 (37%)
AAA 50..205 CDD:214640 67/155 (43%)
ORC4_C 257..430 CDD:291303 41/176 (23%)
ORC4NP_178222.4 CDC6 33..>257 CDD:224391 87/248 (35%)
AAA 53..205 CDD:99707 67/154 (44%)
ORC4_C 217..392 CDD:291303 52/215 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 89 1.000 Domainoid score I2704
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8059
Inparanoid 1 1.050 173 1.000 Inparanoid score I1519
OMA 1 1.010 - - QHG55839
OrthoDB 1 1.010 - - D1543398at2759
OrthoFinder 1 1.000 - - FOG0005811
OrthoInspector 1 1.000 - - oto3711
orthoMCL 1 0.900 - - OOG6_103029
Panther 1 1.100 - - LDO PTHR12087
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4202
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.980

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