DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc4 and orc4

DIOPT Version :9

Sequence 1:NP_477320.1 Gene:Orc4 / 37970 FlyBaseID:FBgn0023181 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_595825.1 Gene:orc4 / 2541298 PomBaseID:SPBP23A10.13 Length:972 Species:Schizosaccharomyces pombe


Alignment Length:490 Identity:140/490 - (28%)
Similarity:239/490 - (48%) Gaps:89/490 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EADRELVSIRRFLKERL-QRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLI 66
            |.|.:|.:|:..:..|| .:.:..|.|:..|::.:...:::|..:||.||::::|||||||:.|:
pombe   528 EIDSQLHTIKSTIAARLCGKSHIPLVGHMDEQTKLYQWVRQTIVLGEGNSVIIVGPRGSGKSVLV 592

  Fly    67 NSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQM--QLENAADGKVFGS---FAENLA 126
            :.:|:...  :...|.:.:|.|:|...|||::||:.|:.|:  :||:....:...|   |::.|.
pombe   593 DDILSRAA--QEINEKSYVVRLNGTYQTDDKLALREISRQLSIELESIESDEALKSEMNFSDTLT 655

  Fly   127 FLLQCLKAGGKH-------------SKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVL 178
            .||..|    .|             |.:|||:|||||||..|..|.|||||||::||.:|||.::
pombe   656 KLLATL----SHPVDLGIAEDVMTTSAAVIFVLEEFDLFVQHSRQMLLYNLFDIAQSRKAPILII 716

  Fly   179 GVTCRLDVIELLEKRVKSRFSHRQVFLFP--SLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNL 241
            |:|.|.|..|.|||||||||||..:.:.|  ||..||                            
pombe   717 GLTTRYDCSESLEKRVKSRFSHMVIPMRPPSSLSEFE---------------------------- 753

  Fly   242 QNIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQICKVLATQQARSTLQAL---HDF---DISEAY 300
             .|....||.|       :.|...::...||:::.::|:  ..||.|..|   |.|   ::...|
pombe   754 -QILKSVLYVS-------DEGGKDQIITCWNQRVDELLS--DTRSHLHKLVQHHYFASRNLKLLY 808

  Fly   301 LKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLII-AIKHHSQIYDRD 364
            : :.||.::: :.|..|.:..|..|.:..:. .|.|:||:..||:|||.|:| |::..::  |..
pombe   809 V-DLLFPILS-MAPDRPLLADEDFANISLKV-SDHKVELVKNLSLLELALLICAVRFEAR--DIP 868

  Fly   365 SFNFEIIYARFSKFAKVSTTMQAVE-----------RSIVLKAFEHLRIAELIMPLTGGAGGGVG 418
            :.||...|..:.:..:.|....|..           |.:.|:|:|.|....||:|:....... |
pombe   869 ACNFNSAYQEYRQLHQSSVINAAASGALAHSSRLWGRDVALEAWETLGSIGLIIPVHPSTNVS-G 932

  Fly   419 KVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQW 453
            .:.::.::.:..:..:.:...::.::.||:...:|
pombe   933 ALSRQCQLWQPEVDINVVSVGLREHRRLPSHYYRW 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc4NP_477320.1 AAA_16 39..178 CDD:289934 59/156 (38%)
AAA 50..205 CDD:214640 72/172 (42%)
ORC4_C 257..430 CDD:291303 44/190 (23%)
orc4NP_595825.1 AAA_16 551..716 CDD:289934 62/170 (36%)
AAA 575..741 CDD:214640 72/171 (42%)
ORC4_C 754..944 CDD:291303 48/204 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I1839
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8059
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005811
OrthoInspector 1 1.000 - - oto100680
orthoMCL 1 0.900 - - OOG6_103029
Panther 1 1.100 - - LDO PTHR12087
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R873
SonicParanoid 1 1.000 - - X4202
TreeFam 00.000 Not matched by this tool.
109.940

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