DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orc4 and orc-4

DIOPT Version :9

Sequence 1:NP_477320.1 Gene:Orc4 / 37970 FlyBaseID:FBgn0023181 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_499348.1 Gene:orc-4 / 176487 WormBaseID:WBGene00012651 Length:387 Species:Caenorhabditis elegans


Alignment Length:352 Identity:70/352 - (19%)
Similarity:114/352 - (32%) Gaps:101/352 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ADRELVSIRRFLKERLQRDYTTLR----GYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTT 64
            :|:|:|:      |..:|....|.    |..::...:..::....:..:....||.|.|..|:.:
 Worm     5 SDQEIVA------ENARRALDLLDDQVFGLTEQERQIENIVYDFLQSKDGKCALLEGERNCGRES 63

  Fly    65 LINSVLADLLPNKSFGE----NTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENL 125
            .:..||     ||...|    |...|..|.|             .|.:|....|...|       
 Worm    64 TLRKVL-----NKYHKELRVINAGFVAADPN-------------YQQELAKEDDEGYF------- 103

  Fly   126 AFLLQCLKAGGKHSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELL 190
                             :|::.:.|.......|..||.:.|  ::......|.....|.|..:.|
 Worm   104 -----------------VFLVRDADKLITPQQQKFLYTMVD--KATHFSWLVFFSVSRHDFAQNL 149

  Fly   191 EKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLS--LPTGNSLLLAAEK-------IYNLQNIQS 246
            :|:..||....||    |.....||.:.|..|..  :|.|:.    .|:       :.|| |.|:
 Worm   150 QKQATSRIPKIQV----SFDATHDYEEYCAALTQFLIPGGSK----CEESECYKRFVKNL-NFQT 205

  Fly   247 GALYFSRNHFDPGEY--------------GFSPRLRDAW-----NKQICKVLATQQA--RSTLQA 290
                :.|..|:...|              |:...:.|.|     :|||.|::.|...  ...|..
 Worm   206 ----WLRPVFETSHYVVLKQLAAQFLMLFGYYCDVEDTWKPEEISKQIRKIVETTSPSYNGKLLI 266

  Fly   291 LHDFDISEAYLKNFLFRLVAHLRPQSP 317
            |.|..:....:...::|||.:.....|
 Worm   267 LKDQTVRAQCVFLCVWRLVQNKESDGP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc4NP_477320.1 AAA_16 39..178 CDD:289934 24/142 (17%)
AAA 50..205 CDD:214640 33/158 (21%)
ORC4_C 257..430 CDD:291303 16/82 (20%)
orc-4NP_499348.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12087
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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