DRSC/TRiP Functional Genomics Resources

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Protein Alignment key and Optn

DIOPT Version :10

Sequence 1:NP_001246503.1 Gene:key / 37967 FlyBaseID:FBgn0041205 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_063132130.1 Gene:Optn / 246294 RGDID:628886 Length:662 Species:Rattus norvegicus


Alignment Length:508 Identity:101/508 - (19%)
Similarity:185/508 - (36%) Gaps:157/508 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RSDVCGNAQEAKETVASTSTQPPTVNCIPVSITASQQQHKSLDSGSSQQQSLATSFIMGEIQSDV 89
            ::|:.|...|.:..:.|:.:...:.  :.:.:|..:.:....:..:|...:...|..||:...|.
  Rat   165 KADLLGIVSELQLKLNSSGSSEDSF--VEIRMTEGEAEGAMKEMRNSAGPTRTDSISMGKCTEDA 227

  Fly    90 -----LKNSVYSQFPSLCSLQGSAEEVVKLQNMMTEYLALKSTLDKVN--QTMLNYHNLTQQWRQ 147
                 .:....||. .||..:|: ::|.:|:      :||:...::::  :...|.|:..:...:
  Rat   228 RTCVEFEELTVSQL-LLCLREGN-QKVERLE------IALREAKERISDFEKKANGHSAIETQTE 284

  Fly   148 EAADREHQYKE------HVKECQAQIAILRVENQE----------LKRDLETKIEQIEGVHTI-- 194
            .:..:|.:.|:      .|:....|:|.|..|.||          :|:.|:.|.:.:|..::.  
  Rat   285 GSTQKEEEDKDPESVGIEVETLNVQVASLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATP 349

  Fly   195 -RLKEQDELRKSVSEKQSLIDNMRVEI---------------------DKLKQLNHSFEFVPEYA 237
             .|.|:.||..|..:.:..:::||.||                     |||.|.::......|..
  Rat   350 SELNEKQELVYSNRKLELQVESMRSEIKMEQAKTEEEKSRLATLQATHDKLLQEHNKALRTIEEL 414

  Fly   238 TESKS--------QELIKKM----------QLDINELKARDIQKQ----EVIKGLQIQNDIYRRD 280
            |:.::        |||.:|:          ||.::|:| :.|.||    |.:..|:.|.::|..|
  Rat   415 TKQQAEKVDKVQLQELSEKLELAEQALASKQLQMDEMK-QTIAKQEEDLETMAVLRAQMEVYCSD 478

  Fly   281 FEMERADREKNAGEKDQYLMDLRSLQRRNQEL----------------------IEALAES---- 319
            |..|||.|||...||:|..:.|..|.:.|.:.                      :.:|.:|    
  Rat   479 FHAERAAREKIHEEKEQLALQLAILLKENNDFEDGGRCGCGRLPQSVYGDHRTGVSSLPQSVYGD 543

  Fly   320 HKASKACSTASPLSSSRSNLREEQRPVRILDPTGASS-------------------------RTS 359
            |:...:....|.....|:.:......|.....||.||                         |||
  Rat   544 HRTGVSSLPQSVYGDHRTGVSSLPHSVYGDHRTGVSSLPHSVYGDHRTGRQSLMEMQCRHGARTS 608

  Fly   360 DTTLR--------------------------CPICSKSFNALSVLQSHVNDCL 386
            |:..:                          ||.|.:....:..||.||.||:
  Rat   609 DSDQQAYLFQRGAEDMSWQHGQQPRSIPIHSCPKCGEVLPDIDTLQIHVMDCI 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
keyNP_001246503.1 Smc <120..>318 CDD:440809 62/283 (22%)
UBAN 230..313 CDD:197361 31/126 (25%)
OptnXP_063132130.1 None

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